https://yangyangli.top/tags/adapter-trimming/Recent content in Adapter Trimming on Bytes of LifeHugo -- gohugo.ioen2026 <a class='hover:underline hover:decoration-primary-400 hover:text-primary-500' href=https://yangyangli.top target=_blank rel='noopener noreferrer'>Yangyang Li</a>Thu, 07 May 2026 00:00:00 +0000https://yangyangli.top/posts/027-deepchopper/Thu, 07 May 2026 00:00:00 +0000https://yangyangli.top/posts/027-deepchopper/<h2 class="relative group">The chimera mystery <div id="the-chimera-mystery" class="anchor"></div> <span class="absolute top-0 w-6 transition-opacity opacity-0 ltr:-left-6 rtl:-right-6 not-prose group-hover:opacity-100 select-none"> <a class="group-hover:text-primary-300 dark:group-hover:text-neutral-700 !no-underline" href="#the-chimera-mystery" aria-label="Anchor">#</a> </span> </h2> <p>Direct RNA sequencing (dRNA-seq) on Oxford Nanopore looks, on paper, like a transcriptomics dream. You sequence native RNA molecules end to end, you keep the modifications, and you skip every reverse-transcription and PCR step that has been quietly polluting short-read data for years. For a while, that was the story we were telling ourselves.</p>https://yangyangli.top/projects/005-deepchopper/Thu, 31 Oct 2024 00:00:00 +0000https://yangyangli.top/projects/005-deepchopper/