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Life is in the code, whether DNA or binary.

2026

DeepChopper: A Genomic Language Model that Cleans Up Nanopore Direct RNA Sequencing

7 May 2026·1754 words·9 mins· loading · loading

Bioinformatics Machine Learning Writing Deep Learning Nanopore Language Model Adapter Trimming Rust

2023

CUDA for Deep Learning Inference in Rust and C++

29 August 2023·1329 words·7 mins· loading · loading

Machine Learning Software Development Rust C++ CUDA

Development Tips

5 July 2023·32 words·1 min· loading · loading

Tools

Efficient Genomic Interval Search Using SIMD-Enhanced COITree

12 March 2023·1026 words·5 mins· loading · loading

Bioinformatics Algorithms Rust Performance

How to Use Noodles Library in Rust

4 March 2023·2058 words·10 mins· loading · loading

Bioinformatics Software Development Rust

2022

Tiling Windows Management in macOS

20 December 2022·497 words·3 mins· loading · loading

Tools MacOS

Make A Powerful Terminal Workspace

15 December 2022·964 words·5 mins· loading · loading

Tools Terminal MacOS

macOS Setup for Development and Research

26 November 2022·Updated: 2 September 2023·3284 words·16 mins· loading · loading

Tools MacOS Development

Code Snippets

22 September 2022·Updated: 4 October 2023·766 words·4 mins· loading · loading

Software Development C++ Rust

Short Code Example

24 June 2022·2258 words·11 mins· loading · loading

C++ Development in Bioinformatics

15 June 2022·1197 words·6 mins· loading · loading

Bioinformatics Software Development C++

2021

Pybox: A Python Toolbox for Common Development Tasks

3 December 2021·487 words·3 mins· loading · loading

Software Development Tools Python CLI

PCA by Python

4 April 2021·980 words·5 mins· loading · loading

Machine Learning Python

2019

Face Recognition in Video

20 June 2019·262 words·2 mins· loading · loading

Machine Learning Deep Learning Computer Vision Python

Nei Saitou Neighbor Joining

3 April 2019·3625 words·18 mins· loading · loading

Bioinformatics Algorithms Python

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